Predicting novel small inhibitors of SARS-CoV-2: Targeting SARS-CoV-2 spike protein, human ACE2 protein and SARS-CoV-2 NsP16 via molecular docking
Lisansüstü Eğitim Enstitüsü, İstanbul Teknik Üniversitesi, 2022
ONUR ÖZER
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Predicting novel small inhibitors of SARS-CoV-2: Targeting SARS-CoV-2 spike protein, human ACE2 protein and SARS-CoV-2 NsP16 via molecular docking
Lisansüstü Eğitim Enstitüsü, İstanbul Teknik Üniversitesi, 2022
ONUR ÖZER
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Omicron BA.1 and BA.2 variants increase the interactions of SARS-CoV-2 spike glycoprotein with ACE2
Journal of Molecular Graphics and Modelling, Vol. 117, Aralık 2022, ISSN: 1093-3263
GÖLCÜK MERT, YILDIZ AHMET, GÜR MERT
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SARS-CoV-2 Delta Variant Decreases Nanobody Binding and ACE2 Blocking Effectivity
Journal of Chemical Information and Modeling, Vol. 62, Mayıs 2022, ISSN: 1549-9596
GÖLCÜK MERT, HACISÜLEYMAN AYSİMA, YILMAZ SEMA ZEYNEP, TAKA ELHAN, YILDIZ AHMET, GÜR MERT
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Screening of Clinically Approved and Investigation Drugs as Potential Inhibitors of SARS-CoV-2: A Combined in silico and in vitro Study
MOLECULAR INFORMATICS, Vol. 41, No. 2, Şubat 2022, ISSN: 1868-1743
DURDAĞI SERDAR, ORHAN MÜGE DİDEM, AKSOYDAN BUSECAN, CALİS SEYMA, DOĞAN BERNA, ŞAHİN KADER, SHAHRAKİ AİDA, IYİSON NECLA BİRGÜL, AVŞAR TİMUÇİN
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Does sampling saliva increase detection of SARS-CoV-2 by RT-PCR? Comparing saliva with oro-nasopharyngeal swabs
Journal of Virological Methods, Vol. 290, No. 114049, Ocak 2021, ISSN: 0166-0934
AKGÜN DOĞAN ÖZLEM, KÖSE BETSİ, AĞAOĞLU NİHAT BUĞRA, YILDIZ JALE, ALKURT GİZEM, KENDİR DEMİRKOL YASEMİN, İRVEM ARZU, DİNLER DOĞANAY GİZEM, DOĞANAY HAMDİ LEVENT
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The origin of SARS-CoV-2 in Istanbul: Sequencing findings from the epicenter of the pandemic in Turkey
Nothern Clinics Of Istanbul, Vol. 7, No. 3, Mayıs 2020, s. 203-209, ISSN: 2148-4902
KARACAN İLKER, KIZILBOĞA AKGÜN TUĞBA, AĞAOĞLU NİHAT BUĞRA, İRVEM ARZU, ALKURT GİZEM, YILDIZ JALE, KÖSE BETSİ, ÖZEL AYŞE SERRA, ALTUNAL LÜTFİYE NİLSUN, CAN NİSAN DENİZCE, KENDİR DEMİRKOL YASEMİN, AYDIN MEHTAP, AKGÜN DOĞAN ÖZLEM, DOĞANAY HAMDİ LEVENT, DİNLER DOĞANAY GİZEM
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Two-Dimensional (2D) materials in the detection of SARS-CoV-2
Microchemical Journal, Vol. 193, Ekim 2023, ISSN: 0026-265X
UZUNOĞLU AYTEKİN, GÜNEŞ ALTUNTAŞ EVRİM, İPEKCİ HASAN HÜSEYİN, ÖZOĞLU ÖZÜM
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INVESTIGATING THE SARS-COV-2 SPECIFIC ANTIBODY RESPONSE IN CONVALESCENT PEDIATRIC COVID-19 PATIENTS
Fen Bilimleri Enstitüsü, İstanbul Teknik Üniversitesi, 2023
FATMA ÖYKÜ ELASLAN
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DETERMINATION OF SARS-CoV-2 SPECIFIC T AND B CELL ACTIVATION IN CONVALESCENT PEDIATRIC COVID-19 PATIENTS
Fen Bilimleri Enstitüsü, İstanbul Teknik Üniversitesi, 2023
ZEYNEP ECE YILDIZ
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Applications of molecular modelling approaches for the identification of novel SARS-COV-2 RdRp inhibitors
Lisansüstü Eğitim Enstitüsü, Bahçeşehir Üniversitesi, 2022
NTSOAKI BAITHEDI MOTAPANYANE
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Exploring the conformational transition between closed and open states of the sars-CoV-2 spike glycoprotein using molecular dynamics simulations
Fen Bilimleri Enstitüsü, İstanbul Teknik Üniversitesi, 2020
CEREN KILINÇ
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Design of short peptides targeting the interaction between SARS-CoV-2 and human ACE2
Bilişim Enstitüsü, İstanbul Teknik Üniversitesi, 2023
NUMAN NUSRET USTA
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Drug Repurposing Against SARS-CoV-2: Targeting NSP16-NSP10 Interaction
Journal of the Turkish Chemical Society Section A: Chemistry, Vol. 8, No. 3, Ağustos 2021, s. 933-940, ISSN: 2149-0120
BADAY SEFER
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The iron(III) and nickel(II) complexes with tetradentate thiosemicarbazones. Synthesis, experimental, theoretical characterization, and antiviral effect against SARS-CoV-2
Journal of Molecular Structure, Vol. 1246, Ocak 2021, ISSN: 0022-2860
ATASEVER ARSLAN BELKIS, KAYA BUŞRA, ŞAHİN ONUR, BADAY SEFER, SAYLAN CEMİL CAN, ÜLKÜSEVEN BAHRİ
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Microbial silver resistance mechanisms: recent developments
WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY, Vol. 38, No. 9, Ocak 2022, s. 17, ISSN: 0959-3993
TERZİOĞLU ERGİ, ARSLAN MEVLÜT, BALABAN BERRAK GÜLÇİN, ÇAKAR ZEYNEP PETEK
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Exploring the binding capacity of lactic acid bacteria derived bacteriocins against RBD of SARS-CoV-2 Omicron variant by molecular simulations
Journal of Biomolecular Structure and Dynamics, Vol. 41, No. 20, Ocak 2023, s. 10774-10784, ISSN: 0739-1102
EROL ISMAİL, KOTİL ENES SEYFULLAH, ORTAKCI FATİH, DURDAĞI SERDAR
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In Silico Analysis of Bacteriocins from Lactic Acid Bacteria Against SARS-CoV-2
Probiotics and Antimicrobial Proteins, Vol. 15, Şubat 2023, s. 17-29, ISSN: 1867-1306
EROL ISMAİL, KOTİL SEYFULLAH ENES, FİDAN ÖZKAN, YETİMAN AHMET EVREN, DURDAĞI SERDAR, ORTAKCI FATİH
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Exploring the binding mechanisms of nanobodies targeting SARS-CoV-2 spike glycoprotein using molecular dynamics simulations
2021 ACS Fall Meeting., Atlanta/AMERİKA BİRLEŞİK DEVLETLERİ, 22 Ağustos 2021
GÖLCÜK MERT, HACISÜLEYMAN AYSİMA, ERMAN BURAK, YILDIZ AHMET, GÜR MERT
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Binding Mechanism of Neutralizing Nanobodies Targeting SARS-CoV-2 Spike Glycoprotein
Journal of Chemical Information and Modeling, Vol. 61, Ocak 2021, ISSN: 1549-9596
GÖLCÜK MERT, HACISÜLEYMAN AYSİMA, ERMAN BURAK, YILDIZ AHMET, GÜR MERT
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