Effective drug design screening in bacterial glycolytic enzymes via targeting alternative allosteric sites
Archives of Biochemistry and Biophysics, Vol. 762, Aralık 2024, s. 110190, ISSN: 0003-9861
TÜRKMENOĞLU İPEK,KURTULUŞ GAMZE,SESAL NÜZHET CENK,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,AYYILDIZ MERVE,ÇELİKER SERKAN,ÖZHELVACI FATİH,DU XIN,YIU GEORGE L.,ARDITI MOSHE,AKTEN EBRU DEMET
@{,
author = {TÜRKMENOĞLU İPEK,KURTULUŞ GAMZE,SESAL NÜZHET CENK,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,AYYILDIZ MERVE,ÇELİKER SERKAN,ÖZHELVACI FATİH,DU XIN,YIU GEORGE L.,ARDITI MOSHE,AKTEN EBRU DEMET},
title = {Effective drug design screening in bacterial glycolytic enzymes via targeting alternative allosteric sites},
journal = {Archives of Biochemistry and Biophysics},
year = 2024,
pages = {110190},
month = 12,
volume = 762
}
|
Topic
Yayın ile ilgili açıklama girilmemiştir.
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Mitoxantrone release from Fmoc-protected amino acids coated magnetic carbon nanotubes: Computational and experimental study for cancer treatment
Journal of Drug Delivery Science and Technology, Vol. 101, Kasım 2024, s. 106291, ISSN: 1773-2247
AYDIN BUĞÇE,GÜNER YILMAZ ÖZDE ZEYNEP,YILMAZ ANIL,KILIÇ ÇEVİRGEL SILA,KARAOĞLU İSMAİL CAN,BOZOĞLU SERDAR,ÖZBUDAK BURÇİN,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,BAL ÖZTÜRK AYÇA,YAVUZ NİLGÜN,GÜNER FATMA SENİHA
@{,
author = {AYDIN BUĞÇE,GÜNER YILMAZ ÖZDE ZEYNEP,YILMAZ ANIL,KILIÇ ÇEVİRGEL SILA,KARAOĞLU İSMAİL CAN,BOZOĞLU SERDAR,ÖZBUDAK BURÇİN,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,BAL ÖZTÜRK AYÇA,YAVUZ NİLGÜN,GÜNER FATMA SENİHA},
title = {Mitoxantrone release from Fmoc-protected amino acids coated magnetic carbon nanotubes: Computational and experimental study for cancer treatment},
journal = {Journal of Drug Delivery Science and Technology},
year = 2024,
pages = {106291},
month = 11,
volume = 101
}
|
Topic
Yayın ile ilgili açıklama girilmemiştir.
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A computational workflow to determine drug candidates alternative to aminoglycosides targeting the decoding center of E. coli ribosome
Journal of Molecular Graphics and Modelling, Vol. 131, Eylül 2024, s. 108817, ISSN: 1093-3263
YÜCE MERVE,ATEŞ BERİL,YAŞAR NESRİN IŞIL,SUNGUR FETHİYE AYLİN,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE
@{,
author = {YÜCE MERVE,ATEŞ BERİL,YAŞAR NESRİN IŞIL,SUNGUR FETHİYE AYLİN,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE},
title = {A computational workflow to determine drug candidates alternative to aminoglycosides targeting the decoding center of E. coli ribosome},
journal = {Journal of Molecular Graphics and Modelling},
year = 2024,
pages = {108817},
month = 9,
volume = 131
}
|
Topic
Yayın ile ilgili açıklama girilmemiştir.
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Exploring Druggable Binding Sites on the Class A GPCRs Using the Residue Interaction Network and Site Identification by Ligand Competitive Saturation
ACS Omega, Vol. 9, No. 38, Eylül 2024, s. 40154-40171, ISSN: 2470-1343
İNAN TUĞÇE,YÜCE MERVE,MACKERELL JR. ALEXANDER D.,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE
@{,
author = {İNAN TUĞÇE,YÜCE MERVE,MacKerell Jr. Alexander D.,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE},
title = {Exploring Druggable Binding Sites on the Class A GPCRs Using the Residue Interaction Network and Site Identification by Ligand Competitive Saturation},
journal = {ACS Omega},
year = 2024,
number = 38,
pages = {40154-40171},
month = 9,
volume = 9
}
|
Topic
Yayın ile ilgili açıklama girilmemiştir.
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Developing multifunctional pectin-based hydrogel for wound dressing: In silico, in vitro and in vivo evaluation
European Polymer Journal, Vol. 216, Ağustos 2024, s. 113280, ISSN: 0014-3057
KOCAAĞA AYŞE BANU,ÖZTÜRK YETKİN,KURÇİN H. CEREN,GÜNER YILMAZ ÖZDE ZEYNEP,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,TATLIER MELKON,ÖZDEMİR İLKAY,KERVANCIOĞLU DEMİRCİ ELİF,KOTİL TUĞBA,SOLAKOĞLU SEYHUN,AKSU BURAK,BATIREL SAİME,BAL ÖZTÜRK AYÇA,GÜNER FATMA SENİHA
@{,
author = {KOCAAĞA AYŞE BANU,ÖZTÜRK YETKİN,KURÇİN H. CEREN,GÜNER YILMAZ ÖZDE ZEYNEP,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,TATLIER MELKON,ÖZDEMİR İLKAY,KERVANCIOĞLU DEMİRCİ ELİF,KOTİL TUĞBA,SOLAKOĞLU SEYHUN,AKSU BURAK,BATIREL SAİME,BAL ÖZTÜRK AYÇA,GÜNER FATMA SENİHA},
title = {Developing multifunctional pectin-based hydrogel for wound dressing: In silico, in vitro and in vivo evaluation},
journal = {European Polymer Journal},
year = 2024,
pages = {113280},
month = 8,
volume = 216
}
|
Topic
Yayın ile ilgili açıklama girilmemiştir.
|
Innovative Use of an Injectable, Self-Healing Drug-Loaded Pectin-Based Hydrogel for Micro- and Supermicro-Vascular Anastomoses
Biomacromolecules, Vol. 25, No. 7, Haziran 2024, s. 3959-3975, ISSN: 1525-7797
KOCAAĞA AYŞE BANU,İNAN TUĞÇE,YAŞAR NESRİN IŞIL,YALÇIN CAN EGE,SUNGUR FETHİYE AYLİN,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,DEMİRÖZ ANIL,KÖMÜRCÜ HASAN,KIZILKILIÇ OSMAN,AYDIN SERVET YEKTA,ÜLGEN ÖVGÜ AYDIN,GÜNER FATMA SENİHA,ARSLAN HAKAN
@{,
author = {KOCAAĞA AYŞE BANU,İNAN TUĞÇE,YAŞAR NESRİN IŞIL,YALÇIN CAN EGE,SUNGUR FETHİYE AYLİN,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,DEMİRÖZ ANIL,KÖMÜRCÜ HASAN,KIZILKILIÇ OSMAN,AYDIN SERVET YEKTA,ÜLGEN ÖVGÜ AYDIN,GÜNER FATMA SENİHA,ARSLAN HAKAN},
title = {Innovative Use of an Injectable, Self-Healing Drug-Loaded Pectin-Based Hydrogel for Micro- and Supermicro-Vascular Anastomoses},
journal = {Biomacromolecules},
year = 2024,
number = 7,
pages = {3959-3975},
month = 6,
volume = 25
}
|
Topic
Yayın ile ilgili açıklama girilmemiştir.
|
Identifying and Assessing Putative Allosteric Sites and Modulators for CXCR4 Predicted through Network Modeling and Site Identification by Ligand Competitive Saturation
The Journal of Physical Chemistry B, Vol. 128, No. 21, Nisan 2024, s. 5157-5174, ISSN: 1520-6106
İNAN TUĞÇE,FLINKO ROBIN,LEWİS GEORGE K.,MACKERELL JR. ALEXANDER D.,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE
@{,
author = {İNAN TUĞÇE,FLINKO ROBIN,Lewis George K.,MacKerell Jr. Alexander D.,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE},
title = {Identifying and Assessing Putative Allosteric Sites and Modulators for CXCR4 Predicted through Network Modeling and Site Identification by Ligand Competitive Saturation},
journal = {The Journal of Physical Chemistry B},
year = 2024,
number = 21,
pages = {5157-5174},
month = 4,
volume = 128
}
|
Topic
Yayın ile ilgili açıklama girilmemiştir.
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Tunnel-like region observed as a potential allosteric site in Staphylococcus aureus Glyceraldehyde-3-phosphate dehydrogenase
Archives of Biochemistry and Biophysics, Vol. 752, No. 109875, Şubat 2024, ISSN: 0003-9861
GÜNER ÖZDE ZEYNEP,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,AKTEN EBRU DEMET
@{,
author = {güner özde zeynep,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,AKTEN EBRU DEMET},
title = {Tunnel-like region observed as a potential allosteric site in Staphylococcus aureus Glyceraldehyde-3-phosphate dehydrogenase},
journal = {Archives of Biochemistry and Biophysics},
year = 2024,
number = 109875,
month = 2,
volume = 752
}
|
Topic
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Exploring species-specific inhibitors with multiple target sites on S. aureus pyruvate kinase using a computational workflow
Journal of Biomolecular Structure and Dynamics, Vol. 41, No. 8, Mayıs 2023, s. 3496-3510, ISSN: 0739-1102
YÜCE MERVE, SARICA ZEHRA, ATEŞ BERİL, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE
@article{article,
author = {YÜCE MERVE, SARICA ZEHRA, ATEŞ BERİL, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE},
title = {Exploring species-specific inhibitors with multiple target sites on S. aureus pyruvate kinase using a computational workflow},
journal = {Journal of Biomolecular Structure and Dynamics},
year = 2023,
number = 8,
pages = {3496-3510},
month = 5,
volume = 41
}
|
Topic
Yayın ile ilgili açıklama girilmemiştir.
|
Using residue interaction networks to explore novel drug target sites on protein structures of antibiotic-resistant species: ribosome complex and glycolytic enzymes
IC2AR 2022: 5th International Caparica Conference in Antibiotic Resistance 2022, 5 Eylül 2022
KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE, İNAN TUĞÇE, YÜCE MERVE, ATEŞ BERİL, SARICA ZEHRA
@inproceedings{inproceedings,
author = {KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE, İNAN TUĞÇE, YÜCE MERVE, ATEŞ BERİL, SARICA ZEHRA},
title = {Using residue interaction networks to explore novel drug target sites on protein structures of antibiotic-resistant species: ribosome complex and glycolytic enzymes},
year = 2022,
month = 9
}
|
Topic
Yayın ile ilgili açıklama girilmemiştir.
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Molecular dynamics simulations can predict the optimum drug loading amount in pectin hydrogels for controlled release
Materials Today Communications, Vol. 31, Haziran 2022, ISSN: 2352-4928
KOCAAGA BANU, GÜNER FATMA SENİHA, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE
@article{article,
author = {KOCAAGA BANU, GÜNER FATMA SENİHA, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE},
title = {Molecular dynamics simulations can predict the optimum drug loading amount in pectin hydrogels for controlled release},
journal = {Materials Today Communications},
year = 2022,
month = 6,
volume = 31
}
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Topic
Yayın ile ilgili açıklama girilmemiştir.
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Potential allosteric sites captured in glycolytic enzymes via residue-based network models: Phosphofructokinase, glyceraldehyde-3-phosphate dehydrogenase and pyruvate kinase
Biophysical Chemistry, Vol. 280, Ocak 2022, ISSN: 0301-4622
ÇELEBİ METEHAN, İNAN TUĞÇE, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE, AKTEN EBRU DEMET
@article{article,
author = {Çelebi Metehan, İNAN TUĞÇE, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE, AKTEN EBRU DEMET},
title = {Potential allosteric sites captured in glycolytic enzymes via residue-based network models: Phosphofructokinase, glyceraldehyde-3-phosphate dehydrogenase and pyruvate kinase},
journal = {Biophysical Chemistry},
year = 2022,
month = 1,
volume = 280
}
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Topic
Yayın ile ilgili açıklama girilmemiştir.
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Pectin–Zeolite-Based Wound Dressings with Controlled Albumin Release
POLYMERS, Vol. 14, No. 3, Ocak 2022, ISSN: 2073-4360
KOCAAGA BANU, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE, TATLIER MELKON, DİNLER DOĞANAY GİZEM, BATIREL SAİME, GÜNER FATMA SENİHA
@article{article,
author = {KOCAAGA BANU, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE, TATLIER MELKON, DİNLER DOĞANAY GİZEM, BATIREL SAİME, GÜNER FATMA SENİHA},
title = {Pectin–Zeolite-Based Wound Dressings with Controlled Albumin Release},
journal = {POLYMERS},
year = 2022,
number = 3,
month = 1,
volume = 14
}
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Topic
Yayın ile ilgili açıklama girilmemiştir.
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Drug repurposing for the S. aureus pyruvate kinase allosteric sites
EMBO Workshop: Advances and Challenges in Biomolecular Simulations, 18 Ekim 2021
YÜCE MERVE, SARICA ZEHRA, ATEŞ BERİL, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE
@inproceedings{inproceedings,
author = {YÜCE MERVE, SARICA ZEHRA, ATEŞ BERİL, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE},
title = {Drug repurposing for the S. aureus pyruvate kinase allosteric sites},
year = 2021,
month = 10
}
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Topic
Yayın ile ilgili açıklama girilmemiştir.
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Coarse-Grained Techniques to Explore Allosteric Signaling at Nascent Peptide Tunnel
CCCE Virtual, 13 Ağustos 2021
YÜCE MERVE, GÜZEL PELİN, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE
@inproceedings{inproceedings,
author = {YÜCE MERVE, GÜZEL PELİN, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE},
title = {Coarse-Grained Techniques to Explore Allosteric Signaling at Nascent Peptide Tunnel},
year = 2021,
month = 8
}
|
Topic
Yayın ile ilgili açıklama girilmemiştir.
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Identification of Allosteric Drug Binding Sites in Different Protein Structures with Gaussian Network Model and Residue Network Model
CCCE Virtual, 13 Ağustos 2021
İNAN TUĞÇE, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE
@inproceedings{inproceedings,
author = {İNAN TUĞÇE, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE},
title = {Identification of Allosteric Drug Binding Sites in Different Protein Structures with Gaussian Network Model and Residue Network Model},
year = 2021,
month = 8
}
|
Topic
Yayın ile ilgili açıklama girilmemiştir.
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Using Molecular Dynamics Simulations to Predict the Optimum Drug Concentration in Pectin Hydrogels with Controlled Release
2021 Global Nanobiotechnology Consortium (GNC) E-Conference, 13 Mart 2021
KOCAAĞA BANU, GÜNER FATMA SENİHA, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE
@inproceedings{inproceedings,
author = {Kocaağa Banu, GÜNER FATMA SENİHA, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE},
title = {Using Molecular Dynamics Simulations to Predict the Optimum Drug Concentration in Pectin Hydrogels with Controlled Release},
year = 2021,
month = 3
}
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Topic
Yayın ile ilgili açıklama girilmemiştir.
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Mitoxantrone-loaded magnetic single walled carbon nanotubes as nanocarriers for cancer treatment
2021 Global Nanobiotechnology Consortium (GNC) E-conference, 13 Mart 2021
GÜNER ÖZDE ZEYNEP, AYDIN BUĞÇE, KARAOĞLU İSMAİL CAN, BOZOĞLU SERDAR, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE, YAVUZ NİLGÜN, GÜNER FATMA SENİHA
@inproceedings{inproceedings,
author = {güner özde zeynep, AYDIN BUĞÇE, Karaoğlu İsmail Can, Bozoğlu Serdar, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE, YAVUZ NİLGÜN, GÜNER FATMA SENİHA},
title = {Mitoxantrone-loaded magnetic single walled carbon nanotubes as nanocarriers for cancer treatment},
year = 2021,
month = 3
}
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Topic
Yayın ile ilgili açıklama girilmemiştir.
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Computational assessment of thermostability in miRNA:CNT system using molecular dynamics simulations
Biochimica et Biophysica Acta (BBA) - General Subjects, Vol. 1865, Ocak 2021, ISSN: 0304-4165
GÜVENSOY AYSA, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE
@article{article,
author = {GÜVENSOY AYSA, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE},
title = {Computational assessment of thermostability in miRNA:CNT system using molecular dynamics simulations},
journal = {Biochimica et Biophysica Acta (BBA) - General Subjects},
year = 2021,
month = 1,
volume = 1865
}
|
Topic
Yayın ile ilgili açıklama girilmemiştir.
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2-Thiobarbituric acid addition improves structural integrity and controlled drug delivery of biocompatible pectin hydrogels
International Journal of Polymeric Materials and Polymeric Biomaterials, Ocak 2021, s. 1-9, ISSN: 0091-4037
GÜNER ÖZDE ZEYNEP,KOCAAGA BANU,BATIREL SAİME,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,GÜNER FATMA SENİHA
@article{article,
author = {güner özde zeynep,KOCAAGA BANU,BATIREL SAİME,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,GÜNER FATMA SENİHA},
title = {2-Thiobarbituric acid addition improves structural integrity and controlled drug delivery of biocompatible pectin hydrogels},
journal = {International Journal of Polymeric Materials and Polymeric Biomaterials},
year = 2021,
pages = {1-9},
month = 1
}
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Topic
Yayın ile ilgili açıklama girilmemiştir.
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Monte Carlo and Molecular Dynamics Simulations suggest controlled release of corticosteroids from mesoporous host MIL-101 (Cr)
Molecular Simulation, Vol. 47, Ocak 2021, ISSN: 0892-7022","1029-0435
AYVAZ KÖROĞLU MERVE, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE, SUNGUR FETHİYE AYLİN
@article{article,
author = {AYVAZ KÖROĞLU MERVE, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE, SUNGUR FETHİYE AYLİN},
title = {Monte Carlo and Molecular Dynamics Simulations suggest controlled release of corticosteroids from mesoporous host MIL-101 (Cr)},
journal = {Molecular Simulation},
year = 2021,
month = 1,
volume = 47
}
|
Topic
Yayın ile ilgili açıklama girilmemiştir.
|
Fmoc-PEG Coated Single-Wall Carbon Nanotube Carriers by Non-covalent Functionalization: An Experimental and Molecular Dynamics Study
Frontiers in Bioengineering and Biotechnology, Vol. 9, Ocak 2021, ISSN: 2296-4185
YENİYURT YEŞİM, KILIÇ SILA, GÜNER ÖZDE ZEYNEP, BOZOĞLU SERDAR, MERAN MEHDİ, BAYSAK ELİF, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE, HIZAL GÜRKAN, YAVUZ NİLGÜN, BATIREL SAİME, GÜNER FATMA SENİHA
@article{article,
author = {Yeniyurt Yeşim, Kılıç Sıla, güner özde zeynep, Bozoğlu Serdar, Meran Mehdi, BAYSAK ELİF, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE, HIZAL GÜRKAN, YAVUZ NİLGÜN, BATIREL SAİME, GÜNER FATMA SENİHA},
title = {Fmoc-PEG Coated Single-Wall Carbon Nanotube Carriers by Non-covalent Functionalization: An Experimental and Molecular Dynamics Study},
journal = {Frontiers in Bioengineering and Biotechnology},
year = 2021,
month = 1,
volume = 9
}
|
Topic
Yayın ile ilgili açıklama girilmemiştir.
|
Repurposing of FDA-approved drugs against active site and potential allosteric drug-binding sites of COVID-19 main protease
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, Vol. 89, No. 11, Ocak 2021, s. 1425-1441, ISSN: 0887-3585
YÜCE MERVE, ÇİÇEK ERDEM, DAĞ ASLIHAN BAŞAK, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE, SUNGUR FETHİYE AYLİN
@article{article,
author = {YÜCE MERVE, Çiçek Erdem, Dağ Aslıhan Başak, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE, SUNGUR FETHİYE AYLİN},
title = {Repurposing of FDA-approved drugs against active site and potential allosteric drug-binding sites of COVID-19 main protease},
journal = {PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS},
year = 2021,
number = 11,
pages = {1425-1441},
month = 1,
volume = 89
}
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Topic
Yayın ile ilgili açıklama girilmemiştir.
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Elucidating doxycycline loading and release performance of imprinted hydrogels with different cross-linker concentrations: a computational and experimental study
Journal of Polymer Research, Vol. 28, Ocak 2021, ISSN: 1022-9760","1572-8935
İNAN TUĞÇE, DALGAKIRAN DİLEK, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE, GÜNER FATMA SENİHA
@article{article,
author = {İNAN TUĞÇE, Dalgakıran Dilek, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE, GÜNER FATMA SENİHA},
title = {Elucidating doxycycline loading and release performance of imprinted hydrogels with different cross-linker concentrations: a computational and experimental study},
journal = {Journal of Polymer Research},
year = 2021,
month = 1,
volume = 28
}
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Topic
Yayın ile ilgili açıklama girilmemiştir.
|
Kaba Ölçekli Elastik Ağyapı Modelleri ve Bakteriyel Ribozomun Yapı-İşlev İlişkisi Protein: Yapısı, Mühendisliği, Etkileşimleri, Dinamiği ve İlaç Tasarımındaki Yeri
Ankara/TÜRKİYE, 2021, s. 259-271, Ankara Nobel Tıp Yayınevi
GÜZEL PELİN, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE
@book{book,
author = {GÜZEL PELİN, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE},
title = {Kaba Ölçekli Elastik Ağyapı Modelleri ve Bakteriyel Ribozomun Yapı-İşlev İlişkisi},
booktitle = {Protein: Yapısı, Mühendisliği, Etkileşimleri, Dinamiği ve İlaç Tasarımındaki Yeri},
year = 2021,
pages = {259-271},
publisher = {Ankara Nobel Tıp Yayınevi}
}
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Topic
Yayın ile ilgili açıklama girilmemiştir.
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Local and Global Motions Underlying Antibiotic Binding in Bacterial Ribosome
Journal of Chemical Information and Modeling, Vol. 60, No. 12, Aralık 2020, s. 6447-6461, ISSN: 1549-9596
KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,GUNES M UNAL,HALİLOĞLU TÜRKAN
@article{article,
author = {KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,Gunes M Unal,HALİLOĞLU TÜRKAN},
title = {Local and Global Motions Underlying Antibiotic Binding in Bacterial Ribosome},
journal = {Journal of Chemical Information and Modeling},
year = 2020,
number = 12,
pages = {6447-6461},
month = 12,
volume = 60
}
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Topic
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Exploring allosteric mechanisms of CXCR4 and implications in drug design
The International Symposium on Health Informatics and Bioinformatics HIBIT 2020, İstanbul/TÜRKİYE, 22 Ekim 2020
İNAN TUĞÇE, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE
@inproceedings{inproceedings,
author = {İNAN TUĞÇE, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE},
title = {Exploring allosteric mechanisms of CXCR4 and implications in drug design},
year = 2020,
month = 10
}
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Topic
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Coupled dynamics around the ribosomal tunnel focusing on macrolide discrimination
The International Symposium on Health Informatics and Bioinformatics HIBIT 2020, İstanbul/TÜRKİYE, 22 Ekim 2020
YÜCE MERVE, GÜZEL PELİN, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE
@inproceedings{inproceedings,
author = {YÜCE MERVE, GÜZEL PELİN, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE},
title = {Coupled dynamics around the ribosomal tunnel focusing on macrolide discrimination},
year = 2020,
month = 10
}
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Topic
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Exploring Allosteric Signaling in the Exit Tunnel of the Bacterial Ribosome by Molecular Dynamics Simulations and Residue Network Model
Frontiers in Molecular Biosciences, Vol. 7, Eylül 2020, ISSN: 2296-889X
GÜZEL PELİN,YILDIRIM HATİCE ZEYNEP,YÜCE MERVE,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE
@article{article,
author = {GÜZEL PELİN,YILDIRIM HATİCE ZEYNEP,YÜCE MERVE,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE},
title = {Exploring Allosteric Signaling in the Exit Tunnel of the Bacterial Ribosome by Molecular Dynamics Simulations and Residue Network Model},
journal = {Frontiers in Molecular Biosciences},
year = 2020,
month = 9,
volume = 7
}
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Topic
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Developing pectin-based hydrogels for controlled drug delivery: A computational and experimental study
3rd International Eurasian Conference on Biological and Chemical Sciences, 19 Mart 2020
KOCAAGA BANU, TATLIER MELKON, GÜNER FATMA SENİHA, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE
@inproceedings{inproceedings,
author = {KOCAAGA BANU, TATLIER MELKON, GÜNER FATMA SENİHA, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE},
title = {Developing pectin-based hydrogels for controlled drug delivery: A computational and experimental study},
year = 2020,
month = 3
}
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Topic
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Pektin ve Bor Bileşikleri İçeren Hidrojel Yara Örtüsü Tasarımı ve Prokain Salımı
3rd International Eurasian Conference on Biological and Chemical Sciences, 19 Mart 2020
İYİSAN NERGİSHAN, YILDIRIM BORA İREM, KOCAAĞA BANU, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE, GÜNER FATMA SENİHA
@inproceedings{inproceedings,
author = {İyisan Nergishan, Yıldırım Bora İrem, Kocaağa Banu, KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE, GÜNER FATMA SENİHA},
title = {Pektin ve Bor Bileşikleri İçeren Hidrojel Yara Örtüsü Tasarımı ve Prokain Salımı},
year = 2020,
month = 3
}
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Topic
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Molecular dynamics simulations of adsorption of long pyrene-PEG chains on athin carbon nanotube
TURKISH JOURNAL OF CHEMISTRY, Vol. 43, No. 4, Ağustos 2019, s. 1159-1169, ISSN: 1300-0527
AKKUS PELİN DENİZ,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE
@article{article,
author = {AKKUS PELİN DENİZ,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE},
title = {Molecular dynamics simulations of adsorption of long pyrene-PEG chains on athin carbon nanotube},
journal = {TURKISH JOURNAL OF CHEMISTRY},
year = 2019,
number = 4,
pages = {1159-1169},
month = 8,
volume = 43
}
|
Topic
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Low‐methoxyl pectin–zeolite hydrogels controlling drug release promote in vitro wound healing
JOURNAL OF APPLIED POLYMER SCIENCE, Vol. 136, No. 24, Mart 2019, s. 47640, ISSN: 0021-8995
KOCAAGA BANU,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,TATLIER MELKON,BATIREL SAİME,GÜNER FATMA SENİHA
@article{article,
author = {KOCAAGA BANU,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,TATLIER MELKON,BATIREL SAİME,GÜNER FATMA SENİHA},
title = {Low‐methoxyl pectin–zeolite hydrogels controlling drug release promote in vitro wound healing},
journal = {JOURNAL OF APPLIED POLYMER SCIENCE},
year = 2019,
number = 24,
pages = {47640},
month = 3,
volume = 136
}
|
Topic
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A computational and experimental approach to develop minocycline-imprinted hydrogels and determination of their drug delivery performances
Journal of Polymer Research, Vol. 25, No. 12, Aralık 2018, s. 258, ISSN: 1022-9760
DALGAKIRAN DİLEK,EROĞLU BÜŞRA,GÜNER FATMA SENİHA,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,İNAN TUĞÇE
@article{article,
author = {DALGAKIRAN DİLEK,EROĞLU BÜŞRA,GÜNER FATMA SENİHA,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,İNAN TUĞÇE},
title = {A computational and experimental approach to develop minocycline-imprinted hydrogels and determination of their drug delivery performances},
journal = {Journal of Polymer Research},
year = 2018,
number = 12,
pages = {258},
month = 12,
volume = 25
}
|
Topic
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Coarse-Grained Approaches to Analyze RibosomalComplexes Dynamics: ENM and RedMD
International Conference on Applied Mathematics, Modeling and Life Science Problems (ICAMLS’xx18), 3 Ekim 2018
GÜZEL PELİN,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE
@inproceedings{inproceedings,
author = {GÜZEL PELİN,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE},
title = {Coarse-Grained Approaches to Analyze RibosomalComplexes Dynamics: ENM and RedMD},
year = 2018,
month = 10
}
|
Topic
Yayın ile ilgili açıklama girilmemiştir.
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Exploring Allosteric Communication in Multiple States of the Bacterial Ribosome Using Residue Network Analysis
TURKISH JOURNAL OF BIOLOGY, Vol. 42, No. 5, Ekim 2018, s. 392-404, ISSN: 13000152
KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE
@article{article,
author = {KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE},
title = {Exploring Allosteric Communication in Multiple States of the Bacterial Ribosome Using Residue Network Analysis},
journal = {TURKISH JOURNAL OF BIOLOGY},
year = 2018,
number = 5,
pages = {392-404},
month = 10,
volume = 42
}
|
Topic
Yayın ile ilgili açıklama girilmemiştir.
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Preparation and Determination of In Vivo and In Vitro Performance of Doxycycline Imprinted Contact Lenses for Corneal Neovascularization Treatment.
Journal of the Turkish Chemical Society, Section A: Chemistry, Vol. 5, No. 3, Ekim 2018, s. 1185-1192, ISSN: 2149-0120
ERKAL İLHAN SİBEL,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,İNAN TUĞÇE,GÜNER ÖZDE ZEYNEP,DALGAKIRAN DİLEK,OKUTAN BEGÜM,TORUN KÖSE GAMZE,OKÇU HEPER AYLİN,GÜRSES ÖZLEM,GÜNER FATMA SENİHA
@article{article,
author = {ERKAL İLHAN SİBEL,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,İNAN TUĞÇE,güner özde zeynep,DALGAKIRAN DİLEK,okutan begüm,torun köse gamze,okçu heper aylin,gürses özlem,GÜNER FATMA SENİHA},
title = {Preparation and Determination of In Vivo and In Vitro Performance of Doxycycline Imprinted Contact Lenses for Corneal Neovascularization Treatment.},
journal = {Journal of the Turkish Chemical Society, Section A: Chemistry},
year = 2018,
number = 3,
pages = {1185-1192},
month = 10,
volume = 5
}
|
Topic
Yayın ile ilgili açıklama girilmemiştir.
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Noncovalent Pyrene-Polyethylene Glycol Coatings of Carbon Nanotubes Achieve in Vitro Biocompatibility
Langmuir, Vol. 34, No. 40, Eylül 2018, s. 12071-12082, ISSN: 0743-7463
MERAN MEHDİ PAVLOVİ,AKKUS PELİN DENİZ,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,BAYSAK ELİF,HIZAL GÜRKAN,HACIOSMANOGLU EBRU,ÜNLÜ AYHAN,YAVUZ NİLGÜN,GÜNER FATMA SENİHA
@article{article,
author = {MERAN MEHDİ PAVLOVİ,AKKUS PELİN DENİZ,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,BAYSAK ELİF,HIZAL GÜRKAN,Hacıosmanoglu Ebru,ÜNLÜ AYHAN,YAVUZ NİLGÜN,GÜNER FATMA SENİHA},
title = {Noncovalent Pyrene-Polyethylene Glycol Coatings of Carbon Nanotubes Achieve in Vitro Biocompatibility},
journal = {Langmuir},
year = 2018,
number = 40,
pages = {12071-12082},
month = 9,
volume = 34
}
|
Topic
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2-Thiobarbitürik Asit ile Tiollendirilmiş Pektin Temelli İlaç Taşıyıcı Hidrojellerin Sentezi
International Eurasian Conference on Biological and Chemical Sciences, 26 Nisan 2018
GÜNER ÖZDE ZEYNEP,KOCAAGA BANU,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,GÜNER FATMA SENİHA
@inproceedings{inproceedings,
author = {güner özde zeynep,KOCAAGA BANU,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,GÜNER FATMA SENİHA},
title = {2-Thiobarbitürik Asit ile Tiollendirilmiş Pektin Temelli İlaç Taşıyıcı Hidrojellerin Sentezi},
year = 2018,
month = 4
}
|
Topic
Yayın ile ilgili açıklama girilmemiştir.
|
Preparation of Doxycycline Imprinted Contact Lenses and Determination of Their In Vivo and In Vitro Performance in Treatment of Corneal Neovascularization
International Eurasian Conference on Biological and Chemical Sciences, 26 Nisan 2018
ERKAL İLHAN SİBEL,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,İNAN TUĞÇE,GÜNER ÖZDE ZEYNEP,OKUTAN BEGÜM,TORUN KÖSE GAMZE,KARABORK AYÇA,OKÇU HEPER AYLİN,GÜRSES ÖZLEM,GÜNER FATMA SENİHA
@inproceedings{inproceedings,
author = {ERKAL İLHAN SİBEL,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,İNAN TUĞÇE,güner özde zeynep,OKUTAN BEGÜM,TORUN KÖSE GAMZE,KARABORK AYÇA,OKÇU HEPER AYLİN,gürses özlem,GÜNER FATMA SENİHA},
title = {Preparation of Doxycycline Imprinted Contact Lenses and Determination of Their In Vivo and In Vitro Performance in Treatment of Corneal Neovascularization},
year = 2018,
month = 4
}
|
Topic
Yayın ile ilgili açıklama girilmemiştir.
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Protein Loaded Pectin-Zeolite Wound Dressing Materials: Preparation, Characterization and Structural Analysis
International Eurasian Conference on Biological and Chemical Sciences, 26 Nisan 2018
KOCAAGA BANU,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,TATLIER MELKON,GÜNER FATMA SENİHA
@inproceedings{inproceedings,
author = {KOCAAGA BANU,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,TATLIER MELKON,GÜNER FATMA SENİHA},
title = {Protein Loaded Pectin-Zeolite Wound Dressing Materials: Preparation, Characterization and Structural Analysis},
year = 2018,
month = 4
}
|
Topic
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A Multiscale Investigation on Controlling Bovine Serum Albumin Adsorption onto Polyurethane Film
JOURNAL OF APPLIED POLYMER SCIENCE, Vol. 135, No. 2, Ocak 2018, s. 45669, ISSN: 0021-8995
HİLKAT KÜRKÇÜOĞLU SELİN SOFİ,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,GÜNER FATMA SENİHA
@article{article,
author = {HİLKAT KÜRKÇÜOĞLU SELİN SOFİ,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,GÜNER FATMA SENİHA},
title = {A Multiscale Investigation on Controlling Bovine Serum Albumin Adsorption onto Polyurethane Film},
journal = {JOURNAL OF APPLIED POLYMER SCIENCE},
year = 2018,
number = 2,
pages = {45669},
month = 1,
volume = 135
}
|
Topic
Yayın ile ilgili açıklama girilmemiştir.
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Identification of Potential Allosteric Communication Pathways Between Functional Sites of the Bacterial Ribosome by Graph and Elastic Network Models
Biochimica et Biophysica Acta (BBA) - General Subjects, Vol. 1861, No. 12, Aralık 2017, s. 3131-3141, ISSN: 03044165
GÜZEL PELİN,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE
@article{article,
author = {GÜZEL PELİN,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE},
title = {Identification of Potential Allosteric Communication Pathways Between Functional Sites of the Bacterial Ribosome by Graph and Elastic Network Models},
journal = {Biochimica et Biophysica Acta (BBA) - General Subjects},
year = 2017,
number = 12,
pages = {3131-3141},
month = 12,
volume = 1861
}
|
Topic
Yayın ile ilgili açıklama girilmemiştir.
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Conformational Dynamics of Bacterial Trigger Factor in Apo and Ribosome-Bound States
PLOS ONE, Vol. 12, No. 4, Nisan 2017, s. 176262, ISSN: 1932-6203
CAN MEHMET TARIK,KURKCUOGLU ZEYNEP,EZEROGLU GOKCE,UYAR ARZU,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,DORUKER TURGUT PEMRA
@article{article,
author = {CAN MEHMET TARIK,KURKCUOGLU ZEYNEP,EZEROGLU GOKCE,UYAR ARZU,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,DORUKER TURGUT PEMRA},
title = {Conformational Dynamics of Bacterial Trigger Factor in Apo and Ribosome-Bound States},
journal = {PLOS ONE},
year = 2017,
number = 4,
pages = {176262},
month = 4,
volume = 12
}
|
Topic
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Hesaplamalı ve Deneysel Yöntemler Kullanılarak Minosiklin ve Doksisiklin Baskılı Hidrojellerin Tasarlanması
12. Ulusal kimya mühendisliği kongresi, 23 Ağustos 2016
EROĞLU BÜŞRA,DALGAKIRAN DİLEK,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,GÜNER FATMA SENİHA
@inproceedings{inproceedings,
author = {EROĞLU Büşra,DALGAKIRAN DİLEK,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,GÜNER FATMA SENİHA},
title = {Hesaplamalı ve Deneysel Yöntemler Kullanılarak Minosiklin ve Doksisiklin Baskılı Hidrojellerin Tasarlanması},
year = 2016,
month = 8
}
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Topic
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Polyurethanes: Surface Protein Adsorption Encyclopedia of Biomedical Polymers and Polymeric Biomaterials
2015, s. 6724-6742, Taylor Francis Group, LLC
KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,GÜNER FATMA SENİHA
@book{book,
author = {KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,GÜNER FATMA SENİHA},
title = {Polyurethanes: Surface Protein Adsorption},
booktitle = {Encyclopedia of Biomedical Polymers and Polymeric Biomaterials},
year = 2015,
pages = {6724-6742},
publisher = {Taylor Francis Group, LLC}
}
|
Topic
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Coarse-Graining the Nano-Machine Ribosome to Elucidate its Functional Dynamics Ribosomes: Molecular Structure Role in Biological Functions and Implications for Genetic Diseases
2013, Nova Science Publishers, Inc
KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,DORUKER TURGUT PEMRA
@book{book,
author = {KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,DORUKER TURGUT PEMRA},
title = {Coarse-Graining the Nano-Machine Ribosome to Elucidate its Functional Dynamics},
booktitle = {Ribosomes: Molecular Structure Role in Biological Functions and Implications for Genetic Diseases},
year = 2013,
publisher = {Nova Science Publishers, Inc}
}
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Topic
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The Elastic Network Model Reveals a Consistent Picture on Intrinsic Functional Dynamics of Type II Restriction Endonucleases
Physical Biology, Vol. 8, No. 5, Ekim 2011, s. 56001, ISSN: 1478-3975
UYAR ARZU,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,NILSSON LENNART,DORUKER TURGUT PEMRA
@article{article,
author = {UYAR ARZU,KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,NILSSON LENNART,DORUKER TURGUT PEMRA},
title = {The Elastic Network Model Reveals a Consistent Picture on Intrinsic Functional Dynamics of Type II Restriction Endonucleases},
journal = {Physical Biology},
year = 2011,
number = 5,
pages = {56001},
month = 10,
volume = 8
}
|
Topic
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Mechanism of Cohesin Loading onto Chromosomes A Conformational Dynamics Study
Biophysical Journal, Vol. 99, No. 4, Ağustos 2010, s. 1212-1220, ISSN: 00063495
KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,BATES PAUL A
@article{article,
author = {KÜRKÇÜOĞLU LEVİTAS AYŞE ÖZGE,BATES PAUL A},
title = {Mechanism of Cohesin Loading onto Chromosomes A Conformational Dynamics Study},
journal = {Biophysical Journal},
year = 2010,
number = 4,
pages = {1212-1220},
month = 8,
volume = 99
}
|
Topic
Yayın ile ilgili açıklama girilmemiştir.
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Focused Functional Dynamics of Supramolecules by Use of a Mixed Resolution Elastic Network Model
Biophysical Journal, Vol. 97, No. 4, Ağustos 2009, s. 1178-1187, ISSN: 00063495
KÜRKÇÜOĞLU AYŞE ÖZGE,TURGUT OSMAN TEOMAN,CANSU SERTAN,JERNIGAN ROBERT L,DORUKER TURGUT PEMRA
@article{article,
author = {KÜRKÇÜOĞLU AYŞE ÖZGE,TURGUT OSMAN TEOMAN,Cansu Sertan,JERNIGAN ROBERT L,DORUKER TURGUT PEMRA},
title = {Focused Functional Dynamics of Supramolecules by Use of a Mixed Resolution Elastic Network Model},
journal = {Biophysical Journal},
year = 2009,
number = 4,
pages = {1178-1187},
month = 8,
volume = 97
}
|
Topic
Yayın ile ilgili açıklama girilmemiştir.
|
Collective Dynamics of the Ribosomal Tunnel Revealed by Elastic Network Modeling
Proteins: Structure, Function, and Bioinformatics, Vol. 75, No. 4, Haziran 2009, s. 837-845, ISSN: 08873585
KÜRKÇÜOĞLU AYŞE ÖZGE,KURKCUOGLU ZEYNEP,DORUKER TURGUT PEMRA,JERNIGAN ROBERT L
@article{article,
author = {KÜRKÇÜOĞLU AYŞE ÖZGE,KURKCUOGLU ZEYNEP,DORUKER TURGUT PEMRA,JERNIGAN ROBERT L},
title = {Collective Dynamics of the Ribosomal Tunnel Revealed by Elastic Network Modeling},
journal = {Proteins: Structure, Function, and Bioinformatics},
year = 2009,
number = 4,
pages = {837-845},
month = 6,
volume = 75
}
|
Topic
Yayın ile ilgili açıklama girilmemiştir.
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The Ribosome Structure Controls and Directs mRNA Entry, Translocation and Exit Dynamics
Physical Biology, Vol. 5, No. 4, Aralık 2008, s. 46005, ISSN: 1478-3975
KÜRKÇÜOĞLU AYŞE ÖZGE,DORUKER TURGUT PEMRA,SEN TANER Z,KLOCZKOWSKI ANDRZEJ ,JERNIGAN ROBERT L
@article{article,
author = {KÜRKÇÜOĞLU AYŞE ÖZGE,DORUKER TURGUT PEMRA,SEN TANER Z,KLOCZKOWSKI ANDRZEJ ,JERNIGAN ROBERT L},
title = {The Ribosome Structure Controls and Directs mRNA Entry, Translocation and Exit Dynamics},
journal = {Physical Biology},
year = 2008,
number = 4,
pages = {46005},
month = 12,
volume = 5
}
|
Topic
Yayın ile ilgili açıklama girilmemiştir.
|
Elastic Network Models of Coarse-Grained Proteins are Effective for Studying the Structural Control Exerted over their Dynamics Coarse Graining of Condensed Phase and Biomolecular Systems
2008, Taylor Francis Group, LLC
JERNIGAN ROBERT L,YANG LEI,SONG G,KÜRKÇÜOĞLU AYŞE ÖZGE,DORUKER TURGUT PEMRA
@book{book,
author = {JERNIGAN ROBERT L,YANG LEI,SONG G,KÜRKÇÜOĞLU AYŞE ÖZGE,DORUKER TURGUT PEMRA},
title = {Elastic Network Models of Coarse-Grained Proteins are Effective for Studying the Structural Control Exerted over their Dynamics},
booktitle = {Coarse Graining of Condensed Phase and Biomolecular Systems},
year = 2008,
publisher = {Taylor Francis Group, LLC}
}
|
Topic
Yayın ile ilgili açıklama girilmemiştir.
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Collective Dynamics of Eco-RI DNA Complex by Elastic Network Model and Molecular Dynamics Simulations
Journal of Biomolecular Structure and Dynamics, Vol. 24, No. 1, Ağustos 2006, s. 1-15, ISSN: 0739-1102
DORUKER TURGUT PEMRA,NILSSON LENNART,KÜRKÇÜOĞLU AYŞE ÖZGE
@article{article,
author = {DORUKER TURGUT PEMRA,NILSSON LENNART,KÜRKÇÜOĞLU AYŞE ÖZGE},
title = {Collective Dynamics of Eco-RI DNA Complex by Elastic Network Model and Molecular Dynamics Simulations},
journal = {Journal of Biomolecular Structure and Dynamics},
year = 2006,
number = 1,
pages = {1-15},
month = 8,
volume = 24
}
|
Topic
Yayın ile ilgili açıklama girilmemiştir.
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Loop Motions of Triosephosphate Isomerase Observed with Elastic Networks
Biochemistry, Vol. 45, No. 4, Ocak 2006, s. 1173-1182, ISSN: 0006-2960
KÜRKÇÜOĞLU AYŞE ÖZGE,JERNIGAN ROBERT L,DORUKER TURGUT PEMRA
@article{article,
author = {KÜRKÇÜOĞLU AYŞE ÖZGE,JERNIGAN ROBERT L,DORUKER TURGUT PEMRA},
title = {Loop Motions of Triosephosphate Isomerase Observed with Elastic Networks},
journal = {Biochemistry},
year = 2006,
number = 4,
pages = {1173-1182},
month = 1,
volume = 45
}
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Topic
Yayın ile ilgili açıklama girilmemiştir.
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Collective Dynamics of Large Proteins from Mixed Coarse Grained Elastic Network Model
QSAR Combinatorial Science, Vol. 24, No. 4, Haziran 2005, s. 443-448, ISSN: 1611-020X
KÜRKÇÜOĞLU AYŞE ÖZGE,JERNIGAN ROBERT L,DORUKER TURGUT PEMRA
@article{article,
author = {KÜRKÇÜOĞLU AYŞE ÖZGE,JERNIGAN ROBERT L,DORUKER TURGUT PEMRA},
title = {Collective Dynamics of Large Proteins from Mixed Coarse Grained Elastic Network Model},
journal = {QSAR Combinatorial Science},
year = 2005,
number = 4,
pages = {443-448},
month = 6,
volume = 24
}
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Topic
Yayın ile ilgili açıklama girilmemiştir.
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Mixed Levels of Coarse Graining of Large Proteins Using Elastic Network Model Succeeds in Extracting the Slowest Motions
Polymer, Vol. 45, No. 2, Ocak 2004, s. 649-657, ISSN: 00323861
KÜRKÇÜOĞLU AYŞE ÖZGE,JERNIGAN ROBERT L,DORUKER TURGUT PEMRA
@article{article,
author = {KÜRKÇÜOĞLU AYŞE ÖZGE,JERNIGAN ROBERT L,DORUKER TURGUT PEMRA},
title = {Mixed Levels of Coarse Graining of Large Proteins Using Elastic Network Model Succeeds in Extracting the Slowest Motions},
journal = {Polymer},
year = 2004,
number = 2,
pages = {649-657},
month = 1,
volume = 45
}
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Topic
Yayın ile ilgili açıklama girilmemiştir.
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