A comparative study of sub grid scale SGS models in the large eddysimulation LES of liquid sloshing
13TH EUROPEAN TURBULENCE CONFERENCE (ETC13): STATISTICAL ASPECTS,MODELLING AND SIMULATIONS OF TURBULENCE, Vol. 318, No. 4, 12 Eylül 2011, s. 42053
KIRLANGIÇ ÖZGÜR,ÇELEBİ MUSTAFA SERDAR
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Simulations of Si-PIN photodiode based detectors for underground explosives enhanced by ammonium nitrate
NUCLEAR INSTRUMENTS METHODS IN PHYSICS RESEARCH SECTION A-ACCELERATORS SPECTROMETERS DETECTORS AND ASSOCIATED EQUIPMENT, Vol. 880, Şubat 2018, s. 152-157, ISSN: 0168-9002
YÜCEL METE,BAYRAK AHMET,BARLAS YÜCEL ESRA,ÖZBEN CENAP ŞAHABETTİN
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Tightly Coupled Multi physics Simulations For Pebble Bed Reactors
Proceedings of the International Conference on Mathematics, Computational Methods Reactor Physics (MC)., 4 Mayıs 2009, s. 1-12
PARK H,GASTON DEREK,KADIOĞLU SAMET YÜCEL
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CO2/CH4 mixed-gas separation in PIM-1 at high pressures: Bridging atomistic simulations with process modeling
Journal of Membrane Science, Vol. 640, Aralık 2021, ISSN: 0376-7388
BALÇIK MARCEL, ERSOLMAZ ŞERİFE BİRGÜL, PİNNAU INGO, AHUNBAY MEHMET GÖKTUĞ
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Thermo-mechanical simulations of selective laser melting for AlSi10Mg alloy to predict the part-scale deformations
Progress in Additive Manufacturing, Vol. 4, No. 4, Eylül 2019, s. 465-478, ISSN: 2363-9512
SÖYLEMEZ EMRECAN,KOÇ EBUBEKİR,COŞKUN MERT
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Protein Folding Simulations Using ECEPP Force Field with Single Solution Based Metaheuristics
IDAP 2016, Malatya/TÜRKİYE, 17 Eylül 2016, s. 104-108
DOĞAN BERAT,ÖLMEZ TAMER
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MOLECULAR DYNAMICS SIMULATIONS OF THE DYNEIN LINKER MOVEMENT
THE 12TH INTERNATIONAL SYMPOSIUM ON HEALTH INFORMATICS AND BIOINFORMATICS, 17 Ekim 2019
GÖLCÜK MERT, TAKA ELHAN, YILMAZ SEMA ZEYNEP, GÜR MERT
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Exploring the binding mechanisms of nanobodies targeting SARS-CoV-2 spike glycoprotein using molecular dynamics simulations
2021 ACS Fall Meeting., Atlanta/AMERİKA BİRLEŞİK DEVLETLERİ, 22 Ağustos 2021
GÖLCÜK MERT, HACISÜLEYMAN AYSİMA, ERMAN BURAK, YILDIZ AHMET, GÜR MERT
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Global motions exhibited by proteins in micro- to milliseconds simulations concur with anisotropic network model predictions
The Journal of Chemical Physics, Vol. 139, No. 12, Eylül 2013, s. 121912, ISSN: 0021-9606
GÜR MERT, ZOMOT ELİA, BAHAR İVET
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Insight into the dynamics of LeuT from multiscale simulations
Gordon research Conferences (GRC) Mechanism of Membrane Transport, 28 Haziran 2015
GÜR MERT,ZOMOT ELİA,CHENG MARY HONGYİNG,BAHAR İVET
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Molecular dynamics simulations of site point mutations in the TPR domain of cyclophilin 40 identify conformational states with distinct dynamic and enzymatic properties
JOURNAL OF CHEMICAL PHYSICS, Vol. 148, No. 14, Nisan 2018, s. 145101, ISSN: 0021-9606
GÜR MERT, BLACKBURN ELIZABETH A, NING JIA, NARAYAN VIKRAM, BALL KATHRYN L, WALKINSHAW MALCOLM D, ERMAN BURAK
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Why protein conformers in molecular dynamics simulations differ from their crystal structures: a thermodynamic insight
TURKISH JOURNAL OF CHEMISTRY, Vol. 43, No. 2, Nisan 2019, s. 394-403, ISSN: 1300-0527
FILIPO PULLARA, WENZHI MAO, GÜR MERT
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Global motions of proteins observed in micro to milliseconds simulations concur with Anisotropic Network Model predictions
Membrane Protein Structural Dynamics Consortium’s Annual Meeting, 29 Nisan 2013
GÜR MERT,ZOMOT ELİA,BAHAR İVET
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Transition pathways of proteins explored by combining Molecular Dynamics simulations and Monte Carlo sampling of collective modes
Biophysical Society 56th Annual Meeting, Vol. 102, No. 3, 25 Şubat 2012, s. 450
GÜR MERT,MADURA JEFFRY,BAHAR İVET
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Molecular dynamics simulations provide molecular insights into the role of HLA‐B51 in Behçet’s disease pathogenesis
Chemical Biology & Drug Design, Vol. 96, No. 1, Temmuz 2020, s. 644-658, ISSN: 1747-0277
GÜR MERT, GÖLCÜK MERT, GÜL AHMET, ERMAN BURAK
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Transition pathways of Dopamine transporters explored by combining Molecular Dynamics simulations and Monte Carlo sampling of collective modes
Membrane Protein Structural Dynamics Consortium’s Annual Meeting, 1 Mayıs 2012
GÜR MERT,MADURA JEFFRY,BAHAR İVET
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Microseconds Simulations Reveal a New Sodium-binding Site and the Mechanism of Sodium-coupled Substrate Uptake by LeuT
JOURNAL OF BIOLOGICAL CHEMISTRY, Vol. 290, No. 1, Ocak 2015, s. 544-555, ISSN: 0021-9258
ZOMOT ELİA,GÜR MERT,BAHAR İVET
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Energy landscape of LeuT from molecular simulations
JOURNAL OF CHEMICAL PHYSICS, Vol. 143, No. 24, Aralık 2015, s. 243134, ISSN: 0021-9606
GÜR MERT,ZOMOT ELİA,CHENG MARY HONGYİNG,BAHAR İVET
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Omicron BA.1 and BA.2 variants increase the interactions of SARS-CoV-2 spike glycoprotein with ACE2
Journal of Molecular Graphics and Modelling, Vol. 117, Aralık 2022, ISSN: 1093-3263
GÖLCÜK MERT, YILDIZ AHMET, GÜR MERT
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SARS-CoV-2 Delta Variant Decreases Nanobody Binding and ACE2 Blocking Effectivity
Journal of Chemical Information and Modeling, Vol. 62, Mayıs 2022, ISSN: 1549-9596
GÖLCÜK MERT, HACISÜLEYMAN AYSİMA, YILMAZ SEMA ZEYNEP, TAKA ELHAN, YILDIZ AHMET, GÜR MERT
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