Molecular docking study on the DNA binding domain of master regulator of the mammalian HSR protein
Fen Bilimleri Enstitüsü, İstanbul Teknik Üniversitesi, 2020
GÜLBAHAR BOZAN
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CONSENSUS ALGORITHM FOR CALCULATION AND LABELING OF PROTEIN BINDING AFFINITY USING MULTIPLE MODELS
Lisansüstü Eğitim Enstitüsü, İstanbul Teknik Üniversitesi, 2023
AYŞENAZ EZGİ ERGİN
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Atpase domain of DnaK, Escherichia coli Hsp70 molecular chaperone, experiences pH-dependent atpase activity upon linker binding
Fen Bilimleri Enstitüsü, İstanbul Teknik Üniversitesi, 2014
RAHMİ İMAMOĞLU
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Bag-1 might act as a regulator on apoptosis/autophagy switch through direct binding to beclin 1
Fen Bilimleri Enstitüsü, İstanbul Teknik Üniversitesi, 2019
MİRAY TÜRK
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Monitoring the ATPase domain dynamics of dnak upon nucleotide binding by using ion mobility mass spectrometry
Fen Bilimleri Enstitüsü, İstanbul Teknik Üniversitesi, 2019
BARAN DİNGİLOĞLU
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Structure and multimerization effects of inorganic binding peptides: phage display selected Pt binders as a case study
2006
SİBEL ÇETİNEL
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Identification of novel inhibitors targeting putative dantrolene binding site for ryanodine receptor 2
Lisansüstü Eğitim Enstitüsü, İstanbul Teknik Üniversitesi, 2022
CEMİL CAN SAYLAN
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Evolutionary engineering of metal-binding/metal-resistant yeast for biomimetics
Fen Bilimleri Enstitüsü, İstanbul Teknik Üniversitesi, 2006
BURCU TURANLI
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Identification of AbrB and Spo0A binding sites on B. subtilis yvfI promoter
Fen Bilimleri Enstitüsü, İstanbul Teknik Üniversitesi, 2010
HÜSEYİN TAYRAN
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Molecular docking study on the DNA binding domain of master regulator of the mammalian HSR protein
Fen Bilimleri Enstitüsü, İstanbul Teknik Üniversitesi, 2020
GÜLBAHAR BOZAN
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Investigation of protonation state dependent conformational dynamics of the nucleotide binding domain of Hsp70 protein homolog Dnak via computational methods
Fen Bilimleri Enstitüsü, İstanbul Teknik Üniversitesi, 2022
UMUT ÇAĞAN UÇAR
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Synthesis of pyridine substituted phthalocyanines and their DNA binding properties
Fen Bilimleri Enstitüsü, İstanbul Teknik Üniversitesi, 2017
MARYAM MOEINI ALISHAH
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Synthesis of quaternized zinc(II) and cobalt(II) phthalocyanines bearing pyridine-2-yl-ethynyl groups and their DNA binding properties
TURKISH JOURNAL OF CHEMISTRY, Vol. 42, No. 2, Nisan 2018, ISSN: 1300-0527
MOEINI ALISHAH MARYAM,YENİLMEZ HACER YASEMİN,ÖZÇEŞMECİ İBRAHİM,SESALAN BEHİCE ŞEBNEM,BAYIR ZEHRA
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DNA and BSA binding studies of novel tetracationic phthalocyanines
JOURNAL OF PORPHYRINS AND PHTHALOCYANINES, Vol. 12, No. 8, Ocak 2008, s. 932-941, ISSN: 1477-9226
ÖZTÜRK RAMAZAN,ŞABAN KALAY,KALKAN BURAT AYFER,TÜRKAN ALİ,ABASIYANIK MUSTAFA FATİH,BAYIR ZEHRA,GÜL AHMET
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DNA Binding Properties of Pyridin 3 yl Substituted Water Soluble Phthalocyanines
International Symposia on Metal Complexes – ISMEC (2016), Barselona, İspanya., 7 Haziran 2016
YENİLMEZ HACER YASEMİN,ALİSHAH MOEİNİ MARYAM,BAYIR ZEHRA
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SARS-CoV-2 Delta Variant Decreases Nanobody Binding and ACE2 Blocking Effectivity
Journal of Chemical Information and Modeling, Vol. 62, Mayıs 2022, ISSN: 1549-9596
GÖLCÜK MERT, HACISÜLEYMAN AYSİMA, YILMAZ SEMA ZEYNEP, TAKA ELHAN, YILDIZ AHMET, GÜR MERT
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Pre-existing soft modes of motion uniquely defined by native contact topology facilitate ligand binding to proteins
Protein Science, Vol. 20, No. 10, Ekim 2011, s. 1645-1658, ISSN: 0961-8368
MEİRELES LİDİO,GÜR MERT,BAKAN AHMET,BAHAR İVET
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Binding Mechanism of Neutralizing Nanobodies Targeting SARS-CoV-2 Spike Glycoprotein
Journal of Chemical Information and Modeling, Vol. 61, Ocak 2021, ISSN: 1549-9596
GÖLCÜK MERT, HACISÜLEYMAN AYSİMA, ERMAN BURAK, YILDIZ AHMET, GÜR MERT
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Microseconds Simulations Reveal a New Sodium-binding Site and the Mechanism of Sodium-coupled Substrate Uptake by LeuT
JOURNAL OF BIOLOGICAL CHEMISTRY, Vol. 290, No. 1, Ocak 2015, s. 544-555, ISSN: 0021-9258
ZOMOT ELİA,GÜR MERT,BAHAR İVET
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Exploring the binding mechanisms of nanobodies targeting SARS-CoV-2 spike glycoprotein using molecular dynamics simulations
2021 ACS Fall Meeting., Atlanta/AMERİKA BİRLEŞİK DEVLETLERİ, 22 Ağustos 2021
GÖLCÜK MERT, HACISÜLEYMAN AYSİMA, ERMAN BURAK, YILDIZ AHMET, GÜR MERT
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