Predicting novel small inhibitors of SARS-CoV-2: Targeting SARS-CoV-2 spike protein, human ACE2 protein and SARS-CoV-2 NsP16 via molecular docking
Lisansüstü Eğitim Enstitüsü, İstanbul Teknik Üniversitesi, 2022
ONUR ÖZER
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Predicting novel small inhibitors of SARS-CoV-2: Targeting SARS-CoV-2 spike protein, human ACE2 protein and SARS-CoV-2 NsP16 via molecular docking
Lisansüstü Eğitim Enstitüsü, İstanbul Teknik Üniversitesi, 2022
ONUR ÖZER
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Screening of Clinically Approved and Investigation Drugs as Potential Inhibitors of SARS-CoV-2: A Combined in silico and in vitro Study
MOLECULAR INFORMATICS, Vol. 41, No. 2, Şubat 2022, ISSN: 1868-1743
DURDAĞI SERDAR, ORHAN MÜGE DİDEM, AKSOYDAN BUSECAN, CALİS SEYMA, DOĞAN BERNA, ŞAHİN KADER, SHAHRAKİ AİDA, IYİSON NECLA BİRGÜL, AVŞAR TİMUÇİN
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Omicron BA.1 and BA.2 variants increase the interactions of SARS-CoV-2 spike glycoprotein with ACE2
Journal of Molecular Graphics and Modelling, Vol. 117, Aralık 2022, ISSN: 1093-3263
GÖLCÜK MERT, YILDIZ AHMET, GÜR MERT
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SARS-CoV-2 Delta Variant Decreases Nanobody Binding and ACE2 Blocking Effectivity
Journal of Chemical Information and Modeling, Vol. 62, Mayıs 2022, ISSN: 1549-9596
GÖLCÜK MERT, HACISÜLEYMAN AYSİMA, YILMAZ SEMA ZEYNEP, TAKA ELHAN, YILDIZ AHMET, GÜR MERT
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Does sampling saliva increase detection of SARS-CoV-2 by RT-PCR? Comparing saliva with oro-nasopharyngeal swabs
Journal of Virological Methods, Vol. 290, No. 114049, Ocak 2021, ISSN: 0166-0934
AKGÜN DOĞAN ÖZLEM, KÖSE BETSİ, AĞAOĞLU NİHAT BUĞRA, YILDIZ JALE, ALKURT GİZEM, KENDİR DEMİRKOL YASEMİN, İRVEM ARZU, DİNLER DOĞANAY GİZEM, DOĞANAY HAMDİ LEVENT
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The origin of SARS-CoV-2 in Istanbul: Sequencing findings from the epicenter of the pandemic in Turkey
Nothern Clinics Of Istanbul, Vol. 7, No. 3, Mayıs 2020, s. 203-209, ISSN: 2148-4902
KARACAN İLKER, KIZILBOĞA AKGÜN TUĞBA, AĞAOĞLU NİHAT BUĞRA, İRVEM ARZU, ALKURT GİZEM, YILDIZ JALE, KÖSE BETSİ, ÖZEL AYŞE SERRA, ALTUNAL LÜTFİYE NİLSUN, CAN NİSAN DENİZCE, KENDİR DEMİRKOL YASEMİN, AYDIN MEHTAP, AKGÜN DOĞAN ÖZLEM, DOĞANAY HAMDİ LEVENT, DİNLER DOĞANAY GİZEM
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Designing novel inhibitors targeting Nsp16 protein for SARS-CoV-2
6th International Eurasian Conference on Biological and Chemical Sciences, Ankara/TÜRKİYE, 11 Ekim 2023
ÖZER ONUR, BADAY SEFER
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Design of short peptides targeting the interaction between SARS-CoV-2 and human ACE2
Bilişim Enstitüsü, İstanbul Teknik Üniversitesi, 2023
NUMAN NUSRET USTA
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INVESTIGATING THE SARS-COV-2 SPECIFIC ANTIBODY RESPONSE IN CONVALESCENT PEDIATRIC COVID-19 PATIENTS
Fen Bilimleri Enstitüsü, İstanbul Teknik Üniversitesi, 2023
FATMA ÖYKÜ ELASLAN
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DETERMINATION OF SARS-CoV-2 SPECIFIC T AND B CELL ACTIVATION IN CONVALESCENT PEDIATRIC COVID-19 PATIENTS
Fen Bilimleri Enstitüsü, İstanbul Teknik Üniversitesi, 2023
ZEYNEP ECE YILDIZ
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Applications of molecular modelling approaches for the identification of novel SARS-COV-2 RdRp inhibitors
Lisansüstü Eğitim Enstitüsü, Bahçeşehir Üniversitesi, 2022
NTSOAKI BAITHEDI MOTAPANYANE
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Exploring the conformational transition between closed and open states of the sars-CoV-2 spike glycoprotein using molecular dynamics simulations
Fen Bilimleri Enstitüsü, İstanbul Teknik Üniversitesi, 2020
CEREN KILINÇ
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Wastewater Based Epidemiology Perspective as a Faster Protocol for Detecting Coronavirus RNA in Human Populations: A Review with Specific Reference to SARS-CoV-2 Virus
Pathogens, Vol. 10, Ocak 2021, ISSN: 2076-0817,
MOUSAZADEH MİLAD, ASHOORİ RAZİEH, PAİTAL BİSWARANJAN, KABDAŞLI NURAY IŞIK, FRONTİSTİS ZACHARİAS, HASHEMİ MARJAN, A. SANDOVAL MİGUEL, SHERCHAN SAMENDRA, DAS KABİTA, MAHDİ EMAMJOMEH MOHAMMAD
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Exploring the binding capacity of lactic acid bacteria derived bacteriocins against RBD of SARS-CoV-2 Omicron variant by molecular simulations
Journal of Biomolecular Structure and Dynamics, Ocak 2023, ISSN: 0739-1102
EROL ISMAİL, KOTİL ENES SEYFULLAH, ORTAKCI FATİH, DURDAĞI SERDAR
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In Silico Analysis of Bacteriocins from Lactic Acid Bacteria Against SARS-CoV-2
Probiotics and Antimicrobial Proteins, Vol. 15, Şubat 2023, s. 17-29, ISSN: 1867-1306
EROL ISMAİL, KOTİL SEYFULLAH ENES, FİDAN ÖZKAN, YETİMAN AHMET EVREN, DURDAĞI SERDAR, ORTAKCI FATİH
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Altered kidney function induced by SARS-CoV-2 infection and acute kidney damage markers predict survival outcomes of COVID-19 patients: a prospective pilot study
Renal Failure, Vol. 44, Şubat 2022, s. 233-240, ISSN: 0886-022X
TEMİZ MUSTAFA ZAFER, HACIBEYOĞLU HALİL İBRAHİM, DİNLER DOĞANAY GİZEM, SEVDİ MEHMET SALİH, DOĞANAY HAMDİ LEVENT, KÜÇÜK SUAT HAYRİ
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Microbial silver resistance mechanisms: recent developments
WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY, Vol. 38, No. 9, Ocak 2022, s. 17, ISSN: 0959-3993
TERZİOĞLU ERGİ, ARSLAN MEVLÜT, BALABAN BERRAK GÜLÇİN, ÇAKAR ZEYNEP PETEK
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Applications Of Molecular Modeling Approaches For The Identification Of Novel Sars-Cov-2 Rdrp Inhibitors
2. Computer-Aided Drug Design Symposium and Workshop - Linking Design, Biology, Chemistry and Medicine, İstanbul/TÜRKİYE, 11 Mayıs 2022
DOĞAN BERNA, DURDAĞI SERDAR, MOTAPANYANE, NTSOAKİ BAİTHEDİ
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Near-physiological-temperature serial crystallography reveals conformations of SARS-CoV-2 main protease active site for improved drug repurposing
STRUCTURE, Vol. 29, No. 12, Aralık 2021, s. 1382, ISSN: 0969-2126
DURDAĞI SERDAR, DOĞAN BERNA, DEMİRCİ HASAN
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