Integrating Ligand and Target-Driven Based Virtual Screening Approaches With in vitro Human Cell Line Models and Time-Resolved Fluorescence Resonance Energy Transfer Assay to Identify Novel Hit Compounds Against BCL-2
FRONTIERS IN CHEMISTRY, Vol. 8, Nisan 2020, ISSN: 2296-2646
TUTUMLU GURBET,DOĞAN BERNA,AVSAR TİMUCİN,ORHAN MUGE DİDEM,CALİS SEYMA,DURDAGİ SERDAR
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Swift-Docking: Neural Network-Based Method to Speed Up Molecular Docking
5TH INTERNATIONAL SYMPOSIUM ON BIOINFORMATICS, istanbul/TÜRKİYE, 15 Aralık 2021
BANDE ABDULSALAM YAZİD,BADAY SEFER
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Synthesis, molecular docking and molecular dynamics studies of novel tacrine-carbamate derivatives as potent cholinesterase inhibitors
BIOORGANIC CHEMISTRY, Vol. 115, Ekim 2021, ISSN: 0045-2068
ÖZTEN ÖZGE, ZENGİN KURT BELMA, SÖNMEZ FATİH, DOĞAN BERNA, DURDAĞI SERDAR
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A Molecular Docking Study on O-Acetylpeptidoglucan Esterase
5th International Bau Drug Design Congress, 19 Ekim 2017
TATAROĞLU MUAMMER MELİN,AKSAKAL ZEYNEP,TÜZÜN NURCAN,SUNGUR FETHİYE AYLİN
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The affinity of histamine to serum albumin: Capillary electrophoresis‐frontal analysis and in‐silico molecular docking approaches
JOURNAL OF SEPARATION SCIENCE, Vol. 46, Eylül 2023, ISSN: 1615-9306
KALAYCIOĞLU ZEYNEP
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A Molecular Docking Study on O-Acetylpeptidoglucan Esterase
5th International Bau Drug Design Congress, 19 Ekim 2017
TATAROĞLU MUAMMER MELİN,AKSAKAL ZEYNEP,TÜZÜN NURCAN,SUNGUR FETHİYE AYLİN
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Molecular docking study on the DNA binding domain of master regulator of the mammalian HSR protein
Fen Bilimleri Enstitüsü, İstanbul Teknik Üniversitesi, 2020
GÜLBAHAR BOZAN
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Structural dependence of protein binding and vibrational spectra of some odor molecules: Molecular docking and TD-DFT study
Lisansüstü Eğitim Enstitüsü, İstanbul Teknik Üniversitesi, 2023
AYSUN SIRMA
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Molecular docking study on the DNA binding domain of master regulator of the mammalian HSR protein
Fen Bilimleri Enstitüsü, İstanbul Teknik Üniversitesi, 2020
GÜLBAHAR BOZAN
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ACCELERATING MOLECULAR DOCKING USING MACHINE LEARNING METHODS
Bilişim Enstitüsü, İstanbul Teknik Üniversitesi, 2022
ABDULSALAM YAZID BANDE
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Drug Repurposing Against SARS-CoV-2: Targeting NSP16-NSP10 Interaction
Journal of the Turkish Chemical Society Section A: Chemistry, Vol. 8, No. 3, Ağustos 2021, s. 933-940, ISSN: 2149-0120
BADAY SEFER
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Depolymerization of actin filaments by Cucurbitacin I throughbinding G-actin
Food Science & Nutrition, Vol. 12, No. 2, Şubat 2024, s. 881-889, ISSN: 2048-7177
HACIOSMANOĞLU EBRU, ÖNSU KEMAL ALPER, SAYLAN CEMİL CAN, GÜNÇER BAŞAK, BADAY SEFER, BEKTAŞ MUHAMMET
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A novel 3-((5-methylpyridin-2-yl)amino)isobenzofuran-1(3H)-one: Molecular structure describe, X-ray diffractions and DFT calculations, antioxidant activity, DNA binding and molecular docking studies
Journal of Molecular Structure, Vol. 1205, Nisan 2020, s. 127585, ISSN: 0022-2860
YILMAZ ZEYNEP TANRIKULU,ODABAŞOĞLU HAKKI YASİN,ŞENEL PELİN,ADIMCILAR VESELİNA,ERDOĞAN TANER,ÖZDEMİR AYŞE,GÖLCÜ AYŞEGÜL,ODABAŞOĞLU MUSTAFA
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A Human Reliability Analysis to Crankshaft Overhauling in Dry-Docking of a General Cargo Ship
Proceedings of the Institution of Mechanical Engineers, Part M: Journal of Engineering for the Maritime Environment, Vol. 235, No. 1, Şubat 2021, s. 93-109, ISSN: 1475-0902","2041-3084
BİÇEN SAMET, KANDEMİR ÇAĞATAY, ÇELİK METİN
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In silico design of novel hERG-neutral sildenafil-like PDE5 inhibitors
JOURNAL OF BIOMOLECULAR STRUCTURE DYNAMICS, Vol. 35, No. 13, 2017, s. 2830-2852, ISSN: 0739-1102
KAYİK GULRU,TÜZÜN NURCAN,DURDAĞI SERDAR
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Synthesis, characterization, anti-inflammatory evaluation, molecular docking and density functional theory studies of metal based drug candidate molecules of tenoxicam
Results in Chemistry, Vol. 3, Ocak 2021, ISSN: 2211-7156
MUSLU HARUN, KALAYCIOĞLU ZEYNEP, ERDOĞAN TANER, GÖLCÜ AYŞEGÜL, ERİM FATMA BEDİA
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Mechanism of Interactions of dsDNA Binding with Apigenin and Its Sulfamate Derivatives Using Multispectroscopic, Voltammetric, and Molecular Docking Studies
ACS Omega, Vol. 6, Ocak 2021, ISSN: 2470-1343
WAİHENYA SİMON, ŞENEL PELİN, J. OSONGA FRANCİS, ERDOĞAN TANER, ALTAY FİLİZ, GÖLCÜ AYŞEGÜL, A. SADİK OMOWUNMİ
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Comparative study of cytotoxic activities, DNA binding and molecular docking interactions of anticancer agent epirubicin and its novel copper complex
Journal of Molecular Structure, Vol. 1232, Ocak 2021, ISSN: 0022-2860
ADIMCILAR VESELİNA, ÇEŞME MUSTAFA, ŞENEL PELİN, DANIŞ İBRAHİM, ÜNAL DURİŞEHVAR, GÖLCÜ AYŞEGÜL
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Elucidation of binding interactions and mechanism of rivastigmine tartrate with dsDNA via multi-spectroscopic, electrochemical, and molecular docking studies
Journal of Molecular Structure, Vol. 1268, Ocak 2022, ISSN: 0022-2860
ALİZADEH NEDA, ŞENEL PELİN, ERDOĞAN TANER, GÖLCÜ AYŞEGÜL
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A novel 3-((5-methylpyridin-2-yl)amino)isobenzofuran-1(3H)-one: Molecular structure describe, X-ray diffractions and DFT calculations, antioxidant activity, DNA binding and molecular docking studies
Journal of Molecular Structure, Vol. 1205, Nisan 2020, s. 127585, ISSN: 0022-2860
YILMAZ ZEYNEP TANRIKULU,ODABAŞOĞLU HAKKI YASİN,ŞENEL PELİN,ADIMCILAR VESELİNA,ERDOĞAN TANER,ÖZDEMİR AYŞE,GÖLCÜ AYŞEGÜL,ODABAŞOĞLU MUSTAFA
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