Integrating Ligand and Target-Driven Based Virtual Screening Approaches With in vitro Human Cell Line Models and Time-Resolved Fluorescence Resonance Energy Transfer Assay to Identify Novel Hit Compounds Against BCL-2
FRONTIERS IN CHEMISTRY, Vol. 8, Nisan 2020, ISSN: 2296-2646
TUTUMLU GURBET,DOĞAN BERNA,AVSAR TİMUCİN,ORHAN MUGE DİDEM,CALİS SEYMA,DURDAGİ SERDAR
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Swift-Docking: Neural Network-Based Method to Speed Up Molecular Docking
5TH INTERNATIONAL SYMPOSIUM ON BIOINFORMATICS, istanbul/TÜRKİYE, 15 Aralık 2021
BANDE ABDULSALAM YAZİD,BADAY SEFER
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Synthesis, molecular docking and molecular dynamics studies of novel tacrine-carbamate derivatives as potent cholinesterase inhibitors
BIOORGANIC CHEMISTRY, Vol. 115, Ekim 2021, ISSN: 0045-2068
ÖZTEN ÖZGE, ZENGİN KURT BELMA, SÖNMEZ FATİH, DOĞAN BERNA, DURDAĞI SERDAR
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Determination of Candidate Alternative Plant Actives for Dementia and Alzheimer’s Disease Proteins through Docking Studies
Süleyman Demirel Üniversitesi Fen Bilimleri Enstitüsü Dergisi, Vol. 27, No. 2, Ocak 2023, ISSN: 1300-7688
SEVİMOĞLU TUBA,ENİSOĞLU ATALAY VİLDAN,ÖZTÜRK AYŞENUR
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De novo Antineoplastic Drug Design to Suppress Head, Neck and Oral Cancer using Theoretical Organic and Biochemistry via Comprehensive Molecular Docking and Dynamics
Asian Pacific Journal of Cancer Prevention, Vol. 25, No. 8, Ağustos 2024, s. 2905-2909, ISSN: 2476-762X
AĞAR SOYKAN,MOKHTARİ MOHADDESEH,YANIK MUHAMMED,AKKURT BARBAROS,ULUKAYA ENGİN,TERZİ RABİA
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The affinity of histamine to serum albumin: Capillary electrophoresis‐frontal analysis and in‐silico molecular docking approaches
JOURNAL OF SEPARATION SCIENCE, Vol. 46, Eylül 2023, ISSN: 1615-9306
KALAYCIOĞLU ZEYNEP
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A Molecular Docking Study on O-Acetylpeptidoglucan Esterase
5th International Bau Drug Design Congress, 19 Ekim 2017
TATAROĞLU MUAMMER MELİN,AKSAKAL ZEYNEP,TÜZÜN NURCAN,SUNGUR FETHİYE AYLİN
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A Molecular Docking Study on O-Acetylpeptidoglucan Esterase
5th International Bau Drug Design Congress, 19 Ekim 2017
TATAROĞLU MUAMMER MELİN,AKSAKAL ZEYNEP,TÜZÜN NURCAN,SUNGUR FETHİYE AYLİN
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Molecular docking study on the DNA binding domain of master regulator of the mammalian HSR protein
Fen Bilimleri Enstitüsü, İstanbul Teknik Üniversitesi, 2020
GÜLBAHAR BOZAN
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Accelerating molecular docking using machine learning methods
Bilişim Enstitüsü, İstanbul Teknik Üniversitesi, 2022
ABDULSALAM YAZID BANDE
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Molecular docking study on the DNA binding domain of master regulator of the mammalian HSR protein
Fen Bilimleri Enstitüsü, İstanbul Teknik Üniversitesi, 2020
GÜLBAHAR BOZAN
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Structural dependence of protein binding and vibrational spectra of some odor molecules: Molecular docking and TD-DFT study
Lisansüstü Eğitim Enstitüsü, İstanbul Teknik Üniversitesi, 2023
AYSUN SIRMA
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A drug repurposing study to target bacterial ribosome decoding center with molecular docking and molecular dynamics simulations
Lisansüstü Eğitim Enstitüsü, İstanbul Teknik Üniversitesi, 2024
BERİL ATEŞ ULUTÜRK
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The Inhibition Mechanism of Pancreatic Ductal Adenocarcinoma via LXR Receptors: A Multifaceted Approach Integrating Molecular Docking, Molecular Dynamics and Post-MD Inter-Molecular Contact Analysis
Asian Pacific Journal of Cancer Prevention, Vol. 24, No. 12, Aralık 2023, s. 4103-4109, ISSN: 2476-762X
AĞAR SOYKAN, AKKURT BARBAROS, ULUKAYA ENGİN
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In Silico Prediction and Molecular Docking of SNPs in NRP1 Gene Associated with SARS-COV-2
Biochemical Genetics, Temmuz 2023, ISSN: 1573-4927
ÖZKAN OKTAY EBRU,KAMAN TUĞBA,KARASAKAL ÖMER FARUK,ENİSOĞLU ATALAY VİLDAN
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Biological activity and molecular docking studies of some new quinolines as potent anticancer agents
Medical Oncology, Vol. 38, Haziran 2021, ISSN: 1357-0560
KULA ATİK TUĞBA, ÖKTEN SALİH, ENİSOĞLU ATALAY VİLDAN, TEKİN ŞABAN, ÇAKMAK OSMAN
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A Docking Study: Modeling of BSA-MetalIon-polycomplexes of Poly (Methyl Vinyl Ether-CO-Maleic Anhydride)
Journal of Chemistry and Chemical Sciences, Vol. 6, Haziran 2018, s. 955-963, ISSN: 2319-7625
ENİSOĞLU ATALAY VİLDAN,ÖLÜÇ İBRAHİM BARIŞ,KARAHAN MESUT
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Modeling of BSA-Metal Ion-Acrylic Acid Complex by Theoretical Methods: Semi-Empirical PM6 and Docking Study
Acta Physica Polonica A, Vol. 134, No. 6, Ocak 2019, s. 1200-1203, ISSN: 1898-794X
ENİSOĞLU ATALAY VİLDAN,ÖLÜÇ İBRAHİM BARIŞ,KARAHAN MESUT
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The Inhibition of RXRα and RXRβ Receptors Provides Valuable Insights for Potential Prostate Cancer Treatment, in silico Molecular Docking and Molecular Dynamics Studies
Asian Pacific Journal of Cancer Prevention, Vol. 25, No. 7, Temmuz 2024, s. 2329-2335, ISSN: 2476-762X
AĞAR SOYKAN,AKKURT BARBAROS,ULUKAYA ENGİN
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Inhibition of pancreatic cancer via LPAR4 receptor with a de novo drug complex design using theoretical organic chemistry: Comprehensive molecular docking, molecular dynamics
Journal of Research in Pharmacy, Vol. 28, No. 4, Ocak 2024, s. 1033-1040, ISSN: 2630-6344
AĞAR SOYKAN,ARASAN YAREN,AKKURT BARBAROS,ULUKAYA ENGİN
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